ComradeShiba So your first version wasn't perfect? That may be a problem for some of us.
Anyway, here's your ship reorganized but with the exterior basically unchanged. It has almost the exact same number of reactors, the exact same number of ammo factories, missile factories, CRs, and FTLs, and only a difference of twelve crew, but I think you'll see it outperforms the first version substantially. I changed a little on the thrusters and added PD since otherwise there were just three thrusters with a whole reactor to themselves, but that's all. Consider all the placeholding structure as blank canvas.

It would really benefit from internal thrusters for reverse and strafing, and you can put in another gun or flak module by moving your EMPs to the back of the wings. They really shouldn't face forward. Dual railguns are also generally a good idea, since two right next to each other really aren't any harder to protect than one is.